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Paul Scherrer Institut PSI BMR: Molecular Cell Biology

Biology and Chemistry
Biomolecular Research
Teaching
Intranet BMR



Updated:
21.02.2010
E-Mail: kurt.ballmer@psi.ch + peter.hasler@psi.ch


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Research

Research

Research focus of Molecular Cell Biology: Transmembrane signaling by receptor tyrosine kinases; a structure/function analysis of

Vascular Endothelial Growth Factors and their receptors.

We also study the structure and function of phosphoinositide phosphatases, Myotubularins, and investigate their role in vesicle

transport, lipid signaling and receptor internalization.

Introduction

The formation of blood and lymphatic vessels is a process of fundamental importance required for the development and maintenance of all organs in higher organisms. In early embryo development, vessels develop from hemangioblasts, a process called vasculogenesis, while later in development and in adult organisms, vessels also derive from preexisting vasculature, a process called angiogenesis. Signaling by vascular endothelial growth factor (VEGF) receptors in endothelial cells establishes the environment required for vessel induction, maturation and maintenance. To build functional vasculature, additional factors such as angiopoietins, TGFβ and PDGF are required giving rise to the complex interplay among different cell types forming mature vasculature.

Signaling by VEGF receptors and the role of co-receptors in signaling

VEGF receptors are type V receptor tyrosine kinases consisting of an extracellular ligand binding domain, a transmembrane sequence and an intracellular tyrosine kinase domain. VEGF receptors are activated upon ligand binding thereby unleashing the kinase activity of the intracellular kinase domain. Activation of VEGF receptors is followed by engagement of downstream signaling molecules with the intracellular kinase domain of VEGF receptors. Receptor activation results in the activation of a plethora of signaling pathways impinging on the molecular network regulating cell migration, division, and fenestration and ultimately vessel formation (Figure 1). We analyze the mechanism of receptor activation and the signaling pathways activated by VEGF receptors and determine cellular responses in live cells using fluorescence videomicroscopy. Investigating the role of specific VEGF isoforms we found that additional receptors for VEGF, so called co-receptors such as neuropilin-1 and heparan sulfate glycosaminoglycans, modulate receptor output. In this way distinct VEGF isoforms generate diverse signal output. Co-receptors are therefore essential for angiogenic signaling by VEGF receptors.

Structure of VEGF ligands and receptors

Structure of VEGF/VEGFR complex (Use IE 8 from Microsoft, with other brousers use pdf)

The structure of several VEGF family ligands and partial structures of the VEGF receptor extracellular domain and of the kinase domain are known. Detailed structural information on receptor ligand/complexes is a prerequisit for an understanding in molecular terms of the signaling properties of VEGF receptors. We study the structure of ligand/receptor complexes using electron microscopy, X-ray crystallography and small angle X-ray or neutron scattering techniques (SAXS and SANS). We recently published negative stain electron microscopy and high resolution X-ray crystallography structures of the extracellular domain of VEGFR-2 bound to VEGF-A and -C. These data show that ligand binding induces drastic changes in receptor structure and reveal the mechanism of receptor specificity of VEGF family growth factors. This structural knowledge is now used to develop new inhibitors for VEGF receptors.
Myotubularins in lipid signaling Several members of the myotubularin gene family were identified as disease causing genes in inherited human diseases. Myotubularins are phosphoinositide phosphatases which dephosphorylate PtdIns-3-P and PtdIns-3,5-P2. This substrate specificity points to a function in endocytosis and vesicular/protein trafficking, e.g. in processes such as receptor tyrosine kinase internalization and degradation. Our research focuses on the structural and functional analysis of Myotubularin-related-proteins 2 and 13 (Mtmr2 and Mtmr13/Sbf2). We use multigene expression vectors for the recombinant production of multiprotein complexes and to bring several fluorescently tagged proteins into cells for time lapse microscopy.

Publications and links

Former projects:

Links to other angiogenesis research groups:

Last update February 2010